Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpod | DXA34_06280 | Not Available | Positive | 1358161 - 1359279 | 43418.0 |
| sam-dependent methyltransferase | DXA34_06285 | Not Available | Positive | 1359365 - 1360066 | 26734.3 |
| nif3-like dinuclear metal center hexameric protein | DXA34_06290 | Not Available | Positive | 1360044 - 1360838 | 29219.2 |
| nucleoside kinase | DXA34_06295 | Not Available | Positive | 1360877 - 1362532 | 63382.1 |
| sdr family nad(p)-dependent oxidoreductase | DXA34_06300 | Not Available | Negative | 1362601 - 1363404 | 28473.2 |
| cpbp family intramembrane metalloprotease | DXA34_06305 | Not Available | Positive | 1363545 - 1364570 | 38866.8 |
| aspartate carbamoyltransferase regulatory subunit | DXA34_06315 | Not Available | Negative | 1365103 - 1365528 | 16178.9 |
| aspartate carbamoyltransferase | DXA34_06320 | Not Available | Negative | 1365522 - 1366445 | 34592.8 |
| hypothetical protein | DXA34_06330 | Not Available | Negative | 1367662 - 1367952 | 11446.7 |
| abc transporter atp-binding protein | DXA34_06335 | Not Available | Positive | 1368393 - 1369160 | 28884.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
