Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hd domain-containing protein | DXA34_06030 | Not Available | Negative | 1302137 - 1302625 | 18406.9 |
| udp-galactopyranose mutase | DXA34_06035 | Not Available | Positive | 1302969 - 1304078 | 43277.9 |
| licd family protein | DXA34_06040 | Not Available | Positive | 1304068 - 1305006 | 36084.1 |
| lipopolysaccharide biosynthesis protein | DXA34_06045 | Not Available | Positive | 1305027 - 1306352 | 49577.9 |
| alanine--glyoxylate aminotransferase family protein | DXA34_06050 | Not Available | Positive | 1306349 - 1307440 | 40310.8 |
| phosphocholine cytidylyltransferase family protein | DXA34_06055 | Not Available | Positive | 1307437 - 1308156 | 27669.1 |
| duf2142 domain-containing protein | DXA34_06060 | Not Available | Positive | 1308288 - 1310261 | 73729.1 |
| glycosyltransferase | DXA34_06065 | Not Available | Positive | 1310289 - 1311152 | 33292.6 |
| glycosyltransferase | DXA34_06070 | Not Available | Positive | 1311280 - 1312239 | 36316.8 |
| glycosyltransferase family 2 protein | DXA34_06075 | Not Available | Positive | 1312319 - 1313008 | 25866.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
