Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_05980 | Not Available | Negative | 1289964 - 1291118 | 42983.6 |
| gntr family transcriptional regulator | DXA34_05985 | Not Available | Positive | 1291487 - 1292152 | 25851.2 |
| autoinducer 2 abc transporter substrate-binding protein | DXA34_05990 | Not Available | Positive | 1292420 - 1293526 | 38430.4 |
| sugar abc transporter atp-binding protein | DXA34_05995 | Not Available | Positive | 1293692 - 1295239 | 56725.0 |
| abc transporter permease | DXA34_06000 | Not Available | Positive | 1295239 - 1296237 | 36107.7 |
| abc transporter permease | DXA34_06005 | Not Available | Positive | 1296254 - 1297336 | 38495.3 |
| l-threonine 3-dehydrogenase | DXA34_06010 | Not Available | Positive | 1297417 - 1298433 | 36411.4 |
| m24 family metallopeptidase | DXA34_06015 | Not Available | Positive | 1298456 - 1299649 | 45458.7 |
| d-ribose pyranase | DXA34_06020 | Not Available | Positive | 1299682 - 1300077 | 14614.0 |
| duf262 domain-containing protein | DXA34_06025 | Not Available | Negative | 1300209 - 1302032 | 71043.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
