Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | DXA34_05875 | Not Available | Positive | 1270960 - 1271418 | 18452.8 |
| dna-binding protein | DXA34_05885 | Not Available | Positive | 1271952 - 1272182 | 8480.22 |
| site-specific integrase | DXA34_05890 | Not Available | Positive | 1272267 - 1273481 | 46086.2 |
| site-specific integrase | DXA34_05895 | Not Available | Positive | 1273644 - 1274852 | 46192.9 |
| duf4160 domain-containing protein | DXA34_05900 | Not Available | Positive | 1275143 - 1275403 | 9976.18 |
| duf2442 domain-containing protein | DXA34_05905 | Not Available | Positive | 1275416 - 1275691 | 10598.9 |
| receptor | DXA34_05910 | Not Available | Positive | 1276220 - 1277485 | 44669.7 |
| branched-chain amino acid abc transporter permease | DXA34_05915 | Not Available | Positive | 1277560 - 1278435 | 30494.7 |
| branched-chain amino acid abc transporter permease | DXA34_05920 | Not Available | Positive | 1278449 - 1279339 | 31430.9 |
| abc transporter atp-binding protein | DXA34_05925 | Not Available | Positive | 1279332 - 1280102 | 28608.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
