Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase | DXA34_05765 | Not Available | Positive | 1248112 - 1248423 | 11168.9 |
| duf1016 domain-containing protein | DXA34_05770 | Not Available | Positive | 1248529 - 1249569 | 40089.9 |
| hypothetical protein | DXA34_05775 | Not Available | Positive | 1249562 - 1249990 | 16565.1 |
| relaxase | DXA34_05780 | Not Available | Positive | 1250047 - 1251462 | 53500.2 |
| hypothetical protein | DXA34_05785 | Not Available | Positive | 1251622 - 1252128 | 19130.2 |
| lysr family transcriptional regulator | DXA34_05790 | Not Available | Negative | 1252070 - 1252930 | 33138.6 |
| atp-grasp domain-containing protein | DXA34_05795 | Not Available | Positive | 1253080 - 1254348 | 47420.4 |
| hypothetical protein | DXA34_05800 | Not Available | Positive | 1254335 - 1255138 | 29302.0 |
| class i sam-dependent methyltransferase | DXA34_05805 | Not Available | Positive | 1255150 - 1255950 | 30571.5 |
| mfs transporter | DXA34_05810 | Not Available | Positive | 1255975 - 1257180 | 43447.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
