Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration dna helicase ruvb | DXA34_05660 | Not Available | Negative | 1221197 - 1222186 | 36561.4 |
| holliday junction branch migration protein ruva | DXA34_05665 | Not Available | Negative | 1222211 - 1222822 | 21676.4 |
| hypothetical protein | DXA34_05675 | Not Available | Positive | 1223238 - 1224107 | 31760.7 |
| prgi family protein | DXA34_05680 | Not Available | Positive | 1224124 - 1224591 | 17279.5 |
| conjugal transfer protein trae | DXA34_05685 | Not Available | Positive | 1224536 - 1226956 | 92101.3 |
| hypothetical protein | DXA34_05690 | Not Available | Positive | 1226937 - 1227305 | 13496.5 |
| chap domain-containing protein | DXA34_05695 | Not Available | Positive | 1227298 - 1229031 | 64024.4 |
| duf4315 family protein | DXA34_05700 | Not Available | Positive | 1229056 - 1229313 | 9609.43 |
| duf4366 domain-containing protein | DXA34_05705 | Not Available | Positive | 1229303 - 1230073 | 27536.7 |
| hypothetical protein | DXA34_05710 | Not Available | Positive | 1230070 - 1230264 | 7532.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
