Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | DXA34_05460 | Not Available | Negative | 1170133 - 1171290 | 44402.2 |
| sodium-dependent transporter | DXA34_05465 | Not Available | Negative | 1171669 - 1173039 | 49802.0 |
| lysr family transcriptional regulator | DXA34_05470 | Not Available | Negative | 1173270 - 1174178 | 35539.8 |
| fad-binding protein | DXA34_05475 | Not Available | Negative | 1174264 - 1175715 | 52391.0 |
| abc transporter permease | DXA34_05480 | Not Available | Negative | 1175767 - 1176432 | 23337.4 |
| methionine abc transporter atp-binding protein | DXA34_05485 | Not Available | Negative | 1176413 - 1177456 | 38919.1 |
| methionine-binding protein | DXA34_05490 | Not Available | Negative | 1177453 - 1178367 | 33273.6 |
| yfcc family protein | DXA34_05495 | Not Available | Negative | 1178607 - 1180010 | 50639.7 |
| m20 family peptidase | DXA34_05500 | Not Available | Negative | 1180023 - 1181216 | 43217.9 |
| lysr family transcriptional regulator | DXA34_05505 | Not Available | Negative | 1181299 - 1182225 | 35548.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
