Segatella copri strain AF11-14

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Segatella

Description

Segatella copri strain AF11-14 is a Gram-negative, rod-shaped bacterium primarily inhabiting the gut of Homo sapiens. This microorganism is classified as an anaerobe, indicating that it thrives in environments devoid of oxygen. The strain is characterized by having a single replicon, which pertains to its genetic structure. The presence of Segatella copri in the human gut microbiome highlights its potential role in human health and disease. As an anaerobic organism, it may contribute to the complex interactions within the gut ecosystem, influencing metabolic processes and maintaining gut homeostasis. The sequencing data for this strain is accessible under the accession number QSAQ00000000.1, facilitating further research into its genetic characteristics and functional capabilities. Exploring the ecological niche that Segatella copri occupies within the human gut underscores its importance in the broader context of microbial diversity and its implications for host health. Understanding the specific functions and contributions of such gut bacteria can provide insights into their roles in digestion, immune response, and the overall balance of the gut microbiome.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusSegatella
SpeciesSegatella copri
Strainstrain AF11-14

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Segatella copri strain AF11-14 AF11-14.Scaf125, whole genome

Gene Summary

Adenine Count

1059450 bp

Thymine Count

1053797 bp

Guanine Count

862983 bp

Cytosine Count

859379 bp

Genome Length

3836054 bp

Protein-coding Genes

3143 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDWV60_04210Not AvailableNegative1015732 - 101647528484.2
polysaccharide deacetylase family proteinDWV60_04215Not AvailableNegative1016524 - 101713524339.2
duf2723 domain-containing proteinDWV60_04220Not AvailableNegative1017209 - 1020643130461.0
abc transporter atp-binding proteinDWV60_04225Not AvailableNegative1020811 - 102152727245.0
zinc abc transporter substrate-binding proteinDWV60_04230Not AvailableNegative1021653 - 102253133120.2
deda family proteinDWV60_04235Not AvailableNegative1022534 - 102298616453.7
hypothetical proteinDWV60_04240Not AvailableNegative1022983 - 102393036052.3
phosphoribosylamine--glycine ligaseDWV60_04245Not AvailableNegative1024055 - 102532346296.5
s9 family peptidaseDWV60_04250Not AvailableNegative1025399 - 102769386952.0
rna methyltransferaseDWV60_04255Not AvailableNegative1027763 - 102934360679.6

Displaying genes 821 – 830 of 3222 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.