Segatella copri strain AF11-14

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Segatella

Description

Segatella copri strain AF11-14 is a Gram-negative, rod-shaped bacterium primarily inhabiting the gut of Homo sapiens. This microorganism is classified as an anaerobe, indicating that it thrives in environments devoid of oxygen. The strain is characterized by having a single replicon, which pertains to its genetic structure. The presence of Segatella copri in the human gut microbiome highlights its potential role in human health and disease. As an anaerobic organism, it may contribute to the complex interactions within the gut ecosystem, influencing metabolic processes and maintaining gut homeostasis. The sequencing data for this strain is accessible under the accession number QSAQ00000000.1, facilitating further research into its genetic characteristics and functional capabilities. Exploring the ecological niche that Segatella copri occupies within the human gut underscores its importance in the broader context of microbial diversity and its implications for host health. Understanding the specific functions and contributions of such gut bacteria can provide insights into their roles in digestion, immune response, and the overall balance of the gut microbiome.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusSegatella
SpeciesSegatella copri
Strainstrain AF11-14

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Segatella copri strain AF11-14 AF11-14.Scaf125, whole genome

Gene Summary

Adenine Count

1059450 bp

Thymine Count

1053797 bp

Guanine Count

862983 bp

Cytosine Count

859379 bp

Genome Length

3836054 bp

Protein-coding Genes

3143 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trigger factorDWV60_03090Not AvailablePositive747008 - 74836651788.4
atp-dependent clp endopeptidase proteolytic subunit clppDWV60_03095Not AvailablePositive748501 - 74916324624.6
atp-dependent clp protease atp-binding subunit clpxDWV60_03100Not AvailablePositive749229 - 75045845635.5
dna helicase recqDWV60_03105Not AvailablePositive750535 - 75271582437.3
imp dehydrogenaseDWV60_03110Not AvailablePositive752819 - 75430352801.7
hypothetical proteinDWV60_03115Not AvailablePositive754318 - 75530437608.4
peptidylprolyl isomeraseDWV60_03120Not AvailablePositive755324 - 75677854615.6
hypothetical proteinDWV60_03125Not AvailablePositive756775 - 75843663775.1
dna mismatch repair endonuclease mutlDWV60_03130Not AvailablePositive758473 - 76034469028.4
ompa family proteinDWV60_03135Not AvailablePositive760494 - 76166642232.9

Displaying genes 601 – 610 of 3222 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.