Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | strain AF11-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1059450 bp
Thymine Count
1053797 bp
Guanine Count
862983 bp
Cytosine Count
859379 bp
Genome Length
3836054 bp
Protein-coding Genes
3143 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | DWV60_01780 | Not Available | Negative | 406780 - 407376 | 23014.7 |
| glycoside hydrolase | DWV60_01785 | Not Available | Positive | 407660 - 410284 | 99394.4 |
| pectate lyase | DWV60_01790 | Not Available | Positive | 410449 - 412197 | 63471.6 |
| hypothetical protein | DWV60_01795 | Not Available | Negative | 412286 - 412939 | 23191.4 |
| hypothetical protein | DWV60_01800 | Not Available | Negative | 413221 - 414786 | 60332.3 |
| pectin esterase | DWV60_01805 | Not Available | Positive | 415189 - 418377 | 115079.0 |
| tonb-dependent receptor | DWV60_01810 | Not Available | Positive | 418811 - 422119 | 121911.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWV60_01815 | Not Available | Positive | 422140 - 424197 | 77536.7 |
| hypothetical protein | DWV60_01820 | Not Available | Positive | 424265 - 425962 | 61453.6 |
| isas1 family transposase | DWV60_01830 | Not Available | Negative | 427494 - 428636 | 43041.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
