Segatella copri strain AF11-14

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Segatella

Description

Segatella copri strain AF11-14 is a Gram-negative, rod-shaped bacterium primarily inhabiting the gut of Homo sapiens. This microorganism is classified as an anaerobe, indicating that it thrives in environments devoid of oxygen. The strain is characterized by having a single replicon, which pertains to its genetic structure. The presence of Segatella copri in the human gut microbiome highlights its potential role in human health and disease. As an anaerobic organism, it may contribute to the complex interactions within the gut ecosystem, influencing metabolic processes and maintaining gut homeostasis. The sequencing data for this strain is accessible under the accession number QSAQ00000000.1, facilitating further research into its genetic characteristics and functional capabilities. Exploring the ecological niche that Segatella copri occupies within the human gut underscores its importance in the broader context of microbial diversity and its implications for host health. Understanding the specific functions and contributions of such gut bacteria can provide insights into their roles in digestion, immune response, and the overall balance of the gut microbiome.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusSegatella
SpeciesSegatella copri
Strainstrain AF11-14

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Segatella copri strain AF11-14 AF11-14.Scaf125, whole genome

Gene Summary

Adenine Count

1059450 bp

Thymine Count

1053797 bp

Guanine Count

862983 bp

Cytosine Count

859379 bp

Genome Length

3836054 bp

Protein-coding Genes

3143 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
u32 family peptidaseDWV60_14390Not AvailablePositive3323859 - 332592278326.7
zinc ribbon domain-containing proteinDWV60_14395Not AvailablePositive3325923 - 332684935370.6
tonb-dependent receptorDWV60_14400Not AvailablePositive3326892 - 332934591781.2
duf5103 domain-containing proteinDWV60_14405Not AvailableNegative3329423 - 333066748436.9
Trna-gluNot AvailableNot AvailablePositive3330769 - 3330843Not Available
Trna-gluNot AvailableNot AvailablePositive3330914 - 3330985Not Available
Trna-serNot AvailableNot AvailablePositive3331061 - 3331150Not Available
hd domain-containing proteinDWV60_14425Not AvailableNegative3331675 - 333230424538.3
1,4-dihydroxy-2-naphthoate octaprenyltransferaseDWV60_14430Not AvailableNegative3332370 - 333328733551.0
hypothetical proteinDWV60_14435Not AvailableNegative3333342 - 333569690121.8

Displaying genes 2811 – 2820 of 3222 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.