Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | strain AF11-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1059450 bp
Thymine Count
1053797 bp
Guanine Count
862983 bp
Cytosine Count
859379 bp
Genome Length
3836054 bp
Protein-coding Genes
3143 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | DWV60_09305 | Not Available | Positive | 2280481 - 2281197 | 26003.4 |
| imidazole glycerol phosphate synthase subunit hisf | DWV60_09310 | Not Available | Positive | 2281258 - 2282037 | 27995.3 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | DWV60_09315 | Not Available | Positive | 2282082 - 2282729 | 24454.3 |
| atp-binding cassette domain-containing protein | DWV60_09320 | Not Available | Positive | 2282761 - 2283477 | 27068.7 |
| aspartate kinase | DWV60_09325 | Not Available | Positive | 2283505 - 2284827 | 49175.0 |
| diaminopimelate decarboxylase | DWV60_09330 | Not Available | Positive | 2284967 - 2286124 | 42664.2 |
| glycosyltransferase | DWV60_09335 | Not Available | Positive | 2286201 - 2287343 | 43952.3 |
| hypothetical protein | DWV60_09340 | Not Available | Positive | 2287407 - 2288180 | 29629.2 |
| atp-dependent helicase hrpb | DWV60_09345 | Not Available | Positive | 2288213 - 2290789 | 95592.2 |
| aaa family atpase | DWV60_09350 | Not Available | Positive | 2291012 - 2292730 | 66696.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
