Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | strain AF11-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1059450 bp
Thymine Count
1053797 bp
Guanine Count
862983 bp
Cytosine Count
859379 bp
Genome Length
3836054 bp
Protein-coding Genes
3143 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DWV60_06610 | Not Available | Positive | 1610665 - 1611975 | 47700.5 |
| 16s rrna processing protein rimm | DWV60_06615 | Not Available | Positive | 1612066 - 1612587 | 19613.1 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DWV60_06620 | Not Available | Positive | 1612599 - 1613759 | 42708.4 |
| rip metalloprotease rsep | DWV60_06625 | Not Available | Positive | 1613870 - 1615252 | 51913.4 |
| lysm peptidoglycan-binding domain-containing protein | DWV60_06630 | Not Available | Negative | 1615346 - 1616296 | 35309.0 |
| hypothetical protein | DWV60_06635 | Not Available | Negative | 1616532 - 1616792 | 9979.29 |
| atp-dependent dna helicase recg | DWV60_06640 | Not Available | Negative | 1617007 - 1619103 | 79640.9 |
| hypothetical protein | DWV60_06645 | Not Available | Positive | 1619143 - 1621158 | 76419.3 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | DWV60_06650 | Not Available | Negative | 1621130 - 1621798 | 24844.5 |
| dj-1/pfpi family protein | DWV60_06655 | Not Available | Negative | 1621839 - 1622411 | 20596.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
