Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | strain AF24-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073777 bp
Thymine Count
1068693 bp
Guanine Count
868650 bp
Cytosine Count
856647 bp
Genome Length
3868997 bp
Protein-coding Genes
3130 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | DWY11_02205 | Not Available | Positive | 553720 - 554670 | 35338.0 |
| rip metalloprotease rsep | DWY11_02210 | Not Available | Negative | 554766 - 556148 | 51956.6 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DWY11_02215 | Not Available | Negative | 556244 - 557404 | 42789.6 |
| 16s rrna processing protein rimm | DWY11_02220 | Not Available | Negative | 557492 - 558013 | 19599.1 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DWY11_02225 | Not Available | Negative | 558052 - 559362 | 47758.5 |
| duf4290 domain-containing protein | DWY11_02230 | Not Available | Negative | 559393 - 559992 | 23225.8 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | DWY11_02235 | Not Available | Negative | 560022 - 560714 | 25249.6 |
| yicc family protein | DWY11_02240 | Not Available | Positive | 560806 - 561684 | 33494.1 |
| guanylate kinase | DWY11_02245 | Not Available | Positive | 561768 - 562343 | 21708.8 |
| nicotinate-nucleotide adenylyltransferase | DWY11_02250 | Not Available | Positive | 562347 - 562919 | 21773.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
