Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | strain AF24-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073777 bp
Thymine Count
1068693 bp
Guanine Count
868650 bp
Cytosine Count
856647 bp
Genome Length
3868997 bp
Protein-coding Genes
3130 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc ribbon domain-containing protein | DWY11_11350 | Not Available | Negative | 2698313 - 2699239 | 35360.6 |
| u32 family peptidase | DWY11_11355 | Not Available | Negative | 2699240 - 2701303 | 78359.8 |
| homoserine o-succinyltransferase | DWY11_11360 | Not Available | Negative | 2701340 - 2702257 | 36040.3 |
| tolc family protein | DWY11_11365 | Not Available | Positive | 2702608 - 2703942 | 49261.6 |
| abc transporter atp-binding protein | DWY11_11375 | Not Available | Positive | 2705201 - 2705977 | 28652.1 |
| abc transporter permease | DWY11_11380 | Not Available | Positive | 2706068 - 2707306 | 44942.8 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | DWY11_11385 | Not Available | Positive | 2707478 - 2708221 | 27891.3 |
| trna lysidine(34) synthetase tils | DWY11_11390 | Not Available | Positive | 2708256 - 2709605 | 51233.0 |
| glycosyl hydrolase family 25 | DWY11_11395 | Not Available | Positive | 2710211 - 2711272 | 40520.5 |
| rna polymerase sigma factor rpod/siga | DWY11_11400 | Not Available | Positive | 2711389 - 2712261 | 32703.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
