Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF31-3
Accession NumberQRQI00000000.1
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dde transposase | DWZ36_00005 | Not Available | + | 50 - 1054 | 39004.1 |
| Trna-asn | Not Available | Not Available | + | 1273 - 1346 | Not Available |
| Trna-asn | Not Available | Not Available | + | 1372 - 1445 | Not Available |
| adenosine kinase | DWZ36_00020 | Not Available | + | 1526 - 2512 | 35238.9 |
| pdz domain-containing protein | DWZ36_00025 | Not Available | + | 2556 - 4250 | 63076.7 |
| hypothetical protein | DWZ36_00030 | Not Available | - | 4316 - 6613 | 87995.0 |
| hypothetical protein | DWZ36_00035 | Not Available | - | 7158 - 7337 | 6740.96 |
| hypothetical protein | DWZ36_00040 | Not Available | - | 7425 - 8093 | 26052.0 |
| mobilization protein | DWZ36_00045 | Not Available | - | 8433 - 9800 | 52872.3 |
| dna primase | DWZ36_00050 | Not Available | - | 10024 - 10950 | 35237.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
