Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_04860 | Not Available | Positive | 1239264 - 1239983 | 27770.4 |
| dna-binding protein | DWZ36_04865 | Not Available | Negative | 1240036 - 1240368 | 13121.9 |
| hypothetical protein | DWZ36_04870 | Not Available | Negative | 1240499 - 1240918 | 16241.2 |
| hypothetical protein | DWZ36_04875 | Not Available | Negative | 1240872 - 1241111 | 9339.02 |
| yafy family transcriptional regulator | DWZ36_04880 | Not Available | Negative | 1241143 - 1242075 | 36298.1 |
| peptidase s51 | DWZ36_04885 | Not Available | Negative | 1242072 - 1242698 | 23458.7 |
| hypothetical protein | DWZ36_04890 | Not Available | Negative | 1242823 - 1243017 | 7443.22 |
| hypothetical protein | DWZ36_04895 | Not Available | Negative | 1243232 - 1243462 | 8796.4 |
| d-xylose transporter xyle | DWZ36_04905 | Not Available | Negative | 1243914 - 1245353 | 52826.7 |
| duf1705 domain-containing protein | DWZ36_04910 | Not Available | Negative | 1245404 - 1247110 | 64929.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

