Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_04700 | Not Available | Positive | 1212217 - 1212489 | 10827.0 |
| site-specific integrase | DWZ36_04705 | Not Available | Positive | 1212657 - 1213244 | 22537.8 |
| hypothetical protein | DWZ36_04715 | Not Available | Positive | 1214140 - 1214937 | 31487.1 |
| hypothetical protein | DWZ36_04720 | Not Available | Negative | 1215319 - 1215621 | 11592.1 |
| hypothetical protein | DWZ36_04725 | Not Available | Negative | 1215741 - 1215920 | 6923.69 |
| hypothetical protein | DWZ36_04730 | Not Available | Negative | 1215984 - 1216205 | 8610.7 |
| hypothetical protein | DWZ36_04735 | Not Available | Positive | 1216388 - 1216597 | 7929.4 |
| ferritin | DWZ36_04740 | Not Available | Positive | 1216759 - 1217211 | 17767.4 |
| marc family protein | DWZ36_04745 | Not Available | Positive | 1217236 - 1217961 | 26995.3 |
| ferritin | DWZ36_04750 | Not Available | Positive | 1218012 - 1218494 | 18391.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

