Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_04400 | Not Available | Negative | 1131438 - 1132163 | 27950.4 |
| hypothetical protein | DWZ36_04405 | Not Available | Negative | 1132160 - 1134691 | 95913.3 |
| hypothetical protein | DWZ36_04410 | Not Available | Negative | 1134696 - 1135334 | 25431.6 |
| duf87 domain-containing protein | DWZ36_04415 | Not Available | Negative | 1135334 - 1138045 | 104141.0 |
| duf4133 domain-containing protein | DWZ36_04420 | Not Available | Negative | 1138156 - 1138449 | 10564.3 |
| duf4134 domain-containing protein | DWZ36_04425 | Not Available | Negative | 1138461 - 1138838 | 13424.2 |
| duf4134 domain-containing protein | DWZ36_04430 | Not Available | Negative | 1138900 - 1139289 | 14192.7 |
| hypothetical protein | DWZ36_04435 | Not Available | Negative | 1139225 - 1139827 | 23178.7 |
| dna primase | DWZ36_04440 | Not Available | Negative | 1139912 - 1140799 | 33989.9 |
| mobilization protein | DWZ36_04445 | Not Available | Negative | 1140907 - 1142013 | 41865.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

