Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenine-n(6)-)-methyltransferase | DWZ36_04350 | Not Available | Negative | 1124396 - 1124995 | 23257.0 |
| hypothetical protein | DWZ36_04355 | Not Available | Negative | 1125045 - 1125380 | 13159.7 |
| conjugative transposon protein tram | DWZ36_04360 | Not Available | Negative | 1125393 - 1126565 | 43203.1 |
| adenine methyltransferase | DWZ36_04365 | Not Available | Negative | 1126549 - 1127031 | 18341.1 |
| hypothetical protein | DWZ36_04370 | Not Available | Negative | 1127046 - 1127417 | 14433.4 |
| conjugative transposon protein trak | DWZ36_04375 | Not Available | Negative | 1127430 - 1128044 | 23609.8 |
| hypothetical protein | DWZ36_04380 | Not Available | Negative | 1128051 - 1128470 | 17258.9 |
| hypothetical protein | DWZ36_04385 | Not Available | Negative | 1128470 - 1129603 | 42015.2 |
| duf5045 domain-containing protein | DWZ36_04390 | Not Available | Negative | 1129618 - 1130388 | 28587.7 |
| site-specific dna-methyltransferase | DWZ36_04395 | Not Available | Negative | 1130457 - 1131227 | 29635.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

