Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_04300 | Not Available | Negative | 1117894 - 1118052 | 5596.99 |
| hypothetical protein | DWZ36_04305 | Not Available | Negative | 1118018 - 1118269 | 9848.86 |
| hypothetical protein | DWZ36_04310 | Not Available | Positive | 1118342 - 1118623 | 11044.3 |
| hypothetical protein | DWZ36_04315 | Not Available | Negative | 1118589 - 1118960 | 14330.8 |
| hypothetical protein | DWZ36_04320 | Not Available | Positive | 1118937 - 1119293 | 13268.0 |
| type iv secretory system conjugative dna transfer family protein | DWZ36_04325 | Not Available | Negative | 1119410 - 1121596 | 83229.4 |
| hypothetical protein | DWZ36_04330 | Not Available | Negative | 1121600 - 1122337 | 28174.2 |
| duf1566 domain-containing protein | DWZ36_04335 | Not Available | Negative | 1122351 - 1123007 | 23979.3 |
| hypothetical protein | DWZ36_04340 | Not Available | Negative | 1123029 - 1123541 | 19050.2 |
| conjugative transposon protein tran | DWZ36_04345 | Not Available | Negative | 1123538 - 1124383 | 32070.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

