Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucuronyl hydrolase | DWZ36_03690 | Not Available | Negative | 936865 - 938091 | 46630.1 |
| nadh-quinone oxidoreductase subunit n | DWZ36_03695 | Not Available | Negative | 938267 - 939688 | 52268.5 |
| nadh-quinone oxidoreductase subunit m | DWZ36_03700 | Not Available | Negative | 939720 - 941201 | 53794.6 |
| nadh-quinone oxidoreductase subunit l | DWZ36_03705 | Not Available | Negative | 941255 - 943156 | 70287.2 |
| nadh-quinone oxidoreductase subunit nuok | DWZ36_03710 | Not Available | Negative | 943159 - 943467 | 11758.6 |
| nadh-quinone oxidoreductase subunit j | DWZ36_03715 | Not Available | Negative | 943473 - 943976 | 18224.2 |
| nadh-quinone oxidoreductase subunit i | DWZ36_03720 | Not Available | Negative | 943992 - 944444 | 16944.7 |
| nadh-quinone oxidoreductase subunit h | DWZ36_03725 | Not Available | Negative | 944444 - 945520 | 40265.7 |
| nadh-quinone oxidoreductase subunit c/d | DWZ36_03730 | Not Available | Negative | 945644 - 947203 | 59743.6 |
| nadh-quinone oxidoreductase subunit b | DWZ36_03735 | Not Available | Negative | 947200 - 947796 | 22081.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

