Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DWZ36_03520 | Not Available | Positive | 895203 - 895814 | 22691.8 |
| (fe-s)-binding protein | DWZ36_03525 | Not Available | Positive | 896126 - 896866 | 27278.1 |
| lactate utilization protein | DWZ36_03530 | Not Available | Positive | 896863 - 898230 | 51553.5 |
| hypothetical protein | DWZ36_03535 | Not Available | Positive | 898234 - 898821 | 21716.1 |
| pyruvate formate lyase-activating protein | DWZ36_03540 | Not Available | Negative | 898923 - 899651 | 27996.5 |
| formate c-acetyltransferase | DWZ36_03545 | Not Available | Negative | 899720 - 901948 | 84089.3 |
| Trna-glu | Not Available | Not Available | Positive | 902152 - 902227 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 902580 - 902669 | Not Available |
| hypothetical protein | DWZ36_03560 | Not Available | Negative | 902648 - 902839 | 7204.75 |
| Trna-cys | Not Available | Not Available | Positive | 903348 - 903422 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

