Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:solute symporter | DWZ36_03420 | Not Available | Positive | 871714 - 873147 | 52062.3 |
| nitronate monooxygenase | DWZ36_03425 | Not Available | Negative | 873356 - 874306 | 34201.4 |
| anaerobic c4-dicarboxylate transporter | DWZ36_03430 | Not Available | Positive | 874548 - 875846 | 45864.3 |
| l-asparaginase 2 | DWZ36_03435 | Not Available | Positive | 876014 - 877072 | 37841.8 |
| hypothetical protein | DWZ36_03440 | Not Available | Positive | 877160 - 878329 | 45070.2 |
| dicarboxylate/amino acid:cation symporter | DWZ36_03445 | Not Available | Negative | 878534 - 879712 | 42070.5 |
| decarboxylating nadp(+)-dependent phosphogluconate dehydrogenase | DWZ36_03450 | Not Available | Positive | 879797 - 881233 | 53031.9 |
| glucose-6-phosphate dehydrogenase | DWZ36_03455 | Not Available | Positive | 881282 - 882790 | 58278.9 |
| 6-phosphogluconolactonase | DWZ36_03460 | Not Available | Positive | 882852 - 883556 | 26347.2 |
| cytochrome d ubiquinol oxidase subunit ii | DWZ36_03465 | Not Available | Negative | 883852 - 884997 | 42794.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

