Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_03360 | Not Available | Positive | 861125 - 861490 | 13987.2 |
| biotin synthase biob | DWZ36_03365 | Not Available | Positive | 861503 - 862462 | 35602.0 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | DWZ36_03370 | Not Available | Positive | 862501 - 863772 | 47784.3 |
| 8-amino-7-oxononanoate synthase | DWZ36_03375 | Not Available | Positive | 863800 - 864951 | 43026.2 |
| duf452 family protein | DWZ36_03380 | Not Available | Positive | 864948 - 865601 | 25104.3 |
| malonyl-[acyl-carrier protein] o-methyltransferase bioc | DWZ36_03385 | Not Available | Positive | 865613 - 866368 | 28797.8 |
| atp-dependent dethiobiotin synthetase biod | DWZ36_03390 | Not Available | Positive | 866383 - 867027 | 24302.0 |
| hypothetical protein | DWZ36_03400 | Not Available | Negative | 867471 - 868196 | 25779.0 |
| atp-binding cassette domain-containing protein | DWZ36_03410 | Not Available | Positive | 869157 - 870605 | 54998.8 |
| dihydrodipicolinate synthase family protein | DWZ36_03415 | Not Available | Positive | 870768 - 871700 | 34028.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

