Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | DWZ36_03045 | Not Available | Positive | 775071 - 776420 | 50768.5 |
| amp-binding protein | DWZ36_03050 | Not Available | Negative | 776952 - 778604 | 62239.3 |
| xre family transcriptional regulator | DWZ36_03055 | Not Available | Negative | 778611 - 779186 | 21391.5 |
| riboflavin synthase | DWZ36_03060 | Not Available | Positive | 779391 - 779993 | 22635.2 |
| yihy/virulence factor brkb family protein | DWZ36_03065 | Not Available | Negative | 780126 - 781454 | 50578.4 |
| hypothetical protein | DWZ36_03080 | Not Available | Negative | 782123 - 782410 | 11413.6 |
| j domain-containing protein | DWZ36_03085 | Not Available | Negative | 782426 - 783397 | 35210.0 |
| sensor histidine kinase | DWZ36_03090 | Not Available | Positive | 783444 - 785447 | 75541.5 |
| bifunctional metallophosphatase/5'-nucleotidase | DWZ36_03095 | Not Available | Positive | 785459 - 787201 | 65563.7 |
| hypothetical protein | DWZ36_03100 | Not Available | Positive | 787206 - 787544 | 12711.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

