Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF31-3
Accession NumberQRQI00000000.1
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s19 | DWZ36_00235 | Not Available | + | 42203 - 42472 | 9895.23 |
| 50s ribosomal protein l22 | DWZ36_00240 | Not Available | + | 42509 - 42919 | 15484.9 |
| 30s ribosomal protein s3 | DWZ36_00245 | Not Available | + | 42926 - 43657 | 27103.1 |
| 50s ribosomal protein l16 | DWZ36_00250 | Not Available | + | 43679 - 44113 | 16206.8 |
| 50s ribosomal protein l29 | DWZ36_00255 | Not Available | + | 44120 - 44314 | 7453.1 |
| 30s ribosomal protein s17 | DWZ36_00260 | Not Available | + | 44326 - 44583 | 9981.21 |
| 50s ribosomal protein l14 | DWZ36_00265 | Not Available | + | 44586 - 44951 | 13058.1 |
| 50s ribosomal protein l24 | DWZ36_00270 | Not Available | + | 44972 - 45295 | 11658.2 |
| 50s ribosomal protein l5 | DWZ36_00275 | Not Available | + | 45295 - 45852 | 20860.8 |
| 30s ribosomal protein s14 | DWZ36_00280 | Not Available | + | 45859 - 46158 | 11077.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
