Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4625 domain-containing protein | DWZ36_02995 | Not Available | Positive | 763892 - 764380 | 17845.0 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | DWZ36_03000 | Not Available | Positive | 764648 - 765934 | 46224.8 |
| l-lactate permease | DWZ36_03005 | Not Available | Positive | 766200 - 767699 | 53067.6 |
| histone h1 | DWZ36_03010 | Not Available | Positive | 767869 - 768042 | 6352.79 |
| duf5113 domain-containing protein | DWZ36_03015 | Not Available | Positive | 768191 - 772588 | 168918.0 |
| dna-binding response regulator | DWZ36_03020 | Not Available | Positive | 772618 - 773346 | 27616.5 |
| transporter | DWZ36_03025 | Not Available | Positive | 773336 - 774052 | 27014.7 |
| Trna-arg | Not Available | Not Available | Positive | 774122 - 774195 | Not Available |
| hypothetical protein | DWZ36_03035 | Not Available | Positive | 774404 - 774586 | 6797.3 |
| hypothetical protein | DWZ36_03040 | Not Available | Positive | 774580 - 774894 | 11217.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

