Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_02940 | Not Available | Negative | 754648 - 754944 | 11622.0 |
| hypothetical protein | DWZ36_02950 | Not Available | Positive | 755931 - 756164 | 9156.62 |
| magnesium and cobalt transport protein cora | DWZ36_02955 | Not Available | Positive | 756540 - 757580 | 40193.7 |
| lrp/asnc family transcriptional regulator | DWZ36_02960 | Not Available | Negative | 757605 - 758075 | 17922.8 |
| hypothetical protein | DWZ36_02965 | Not Available | Positive | 758267 - 758692 | 15933.2 |
| deda family protein | DWZ36_02970 | Not Available | Positive | 758825 - 759469 | 24485.6 |
| duf47 domain-containing protein | DWZ36_02975 | Not Available | Positive | 759509 - 760156 | 25166.3 |
| inorganic phosphate transporter | DWZ36_02980 | Not Available | Positive | 760173 - 761186 | 36015.0 |
| hypothetical protein | DWZ36_02985 | Not Available | Positive | 761325 - 761687 | 13833.0 |
| tonb-dependent receptor | DWZ36_02990 | Not Available | Positive | 761736 - 763895 | 82000.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

