Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DWZ36_02890 | Not Available | Positive | 742432 - 743199 | 27510.8 |
| tetr/acrr family transcriptional regulator | DWZ36_02895 | Not Available | Positive | 743229 - 743882 | 25470.9 |
| tolc family protein | DWZ36_02900 | Not Available | Positive | 743919 - 745244 | 49635.6 |
| efflux rnd transporter periplasmic adaptor subunit | DWZ36_02905 | Not Available | Positive | 745268 - 746290 | 37687.0 |
| acrb/acrd/acrf family protein | DWZ36_02910 | Not Available | Positive | 746372 - 749542 | 115925.0 |
| hypothetical protein | DWZ36_02915 | Not Available | Positive | 749615 - 749908 | 11224.5 |
| hypothetical protein | DWZ36_02920 | Not Available | Positive | 750045 - 751412 | 50804.9 |
| hypothetical protein | DWZ36_02925 | Not Available | Positive | 751399 - 752361 | 35851.4 |
| mboat family protein | DWZ36_02930 | Not Available | Positive | 752339 - 753820 | 57278.7 |
| acyltransferase | DWZ36_02935 | Not Available | Negative | 753877 - 754614 | 27125.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

