Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_02830 | Not Available | Positive | 719227 - 719715 | 18750.2 |
| hypothetical protein | DWZ36_02835 | Not Available | Positive | 719754 - 719960 | 7561.87 |
| viral a-type inclusion protein | DWZ36_02840 | Not Available | Positive | 719957 - 723604 | 135596.0 |
| hypothetical protein | DWZ36_02845 | Not Available | Positive | 723606 - 724070 | 17756.5 |
| terb family tellurite resistance protein | DWZ36_02855 | Not Available | Positive | 727800 - 728105 | 11102.4 |
| hypothetical protein | DWZ36_02860 | Not Available | Positive | 728110 - 728823 | 25043.5 |
| mfs transporter | DWZ36_02865 | Not Available | Positive | 728826 - 729014 | 6600.75 |
| efflux rnd transporter periplasmic adaptor subunit | DWZ36_02875 | Not Available | Positive | 736528 - 737739 | 43722.5 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | DWZ36_02880 | Not Available | Positive | 737793 - 741011 | 116875.0 |
| tolc family protein | DWZ36_02885 | Not Available | Positive | 741023 - 742408 | 50365.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

