Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1320 domain-containing protein | DWZ36_02780 | Not Available | Negative | 712090 - 712515 | 16566.8 |
| hypothetical protein | DWZ36_02785 | Not Available | Negative | 712537 - 714069 | 59040.7 |
| helix-turn-helix domain-containing protein | DWZ36_02790 | Not Available | Negative | 714081 - 714524 | 16567.8 |
| clp protease clpp | DWZ36_02795 | Not Available | Positive | 714662 - 715768 | 41614.1 |
| hypothetical protein | DWZ36_02800 | Not Available | Positive | 715776 - 716975 | 43890.1 |
| lysozyme | DWZ36_02805 | Not Available | Positive | 716982 - 717446 | 17234.4 |
| hypothetical protein | DWZ36_02810 | Not Available | Positive | 717462 - 717851 | 13945.4 |
| hypothetical protein | DWZ36_02815 | Not Available | Positive | 717880 - 718359 | 17081.1 |
| hypothetical protein | DWZ36_02820 | Not Available | Positive | 718376 - 718651 | 10102.1 |
| hypothetical protein | DWZ36_02825 | Not Available | Positive | 718648 - 719223 | 20557.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

