Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_02680 | Not Available | Positive | 699879 - 700271 | 15193.2 |
| hypothetical protein | DWZ36_02685 | Not Available | Positive | 700417 - 700683 | 9878.74 |
| hypothetical protein | DWZ36_02690 | Not Available | Positive | 700745 - 701125 | 14625.5 |
| hypothetical protein | DWZ36_02695 | Not Available | Positive | 701137 - 703242 | 81020.0 |
| atp-binding protein | DWZ36_02700 | Not Available | Positive | 703279 - 704160 | 32770.4 |
| hypothetical protein | DWZ36_02705 | Not Available | Positive | 704157 - 704414 | 9723.77 |
| hypothetical protein | DWZ36_02710 | Not Available | Positive | 704383 - 705045 | 25328.6 |
| rna polymerase subunit sigma | DWZ36_02715 | Not Available | Positive | 705026 - 705247 | 8807.68 |
| duf4406 domain-containing protein | DWZ36_02720 | Not Available | Positive | 705247 - 705717 | 17790.2 |
| hypothetical protein | DWZ36_02725 | Not Available | Positive | 705736 - 705969 | 8993.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

