Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3440 domain-containing protein | DWZ36_02580 | Not Available | Negative | 673160 - 674461 | 52313.9 |
| hypothetical protein | DWZ36_02585 | Not Available | Negative | 674454 - 674846 | 15101.9 |
| nadp-specific glutamate dehydrogenase | DWZ36_02590 | Not Available | Negative | 675008 - 676345 | 48508.4 |
| phosphoenolpyruvate synthase | DWZ36_02595 | Not Available | Positive | 676580 - 679537 | 112927.0 |
| duf4925 domain-containing protein | DWZ36_02600 | Not Available | Positive | 679647 - 680852 | 43424.5 |
| port family protein | DWZ36_02605 | Not Available | Negative | 681709 - 682485 | 29116.1 |
| hypothetical protein | DWZ36_02610 | Not Available | Negative | 682494 - 683642 | 42381.6 |
| nadp-specific glutamate dehydrogenase | DWZ36_02615 | Not Available | Negative | 683798 - 685132 | 48972.7 |
| hypothetical protein | DWZ36_02620 | Not Available | Negative | 685288 - 685470 | 6713.74 |
| nadp-dependent malic enzyme | DWZ36_02625 | Not Available | Negative | 685599 - 687884 | 84197.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

