Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| blai/meci/copy family transcriptional regulator | DWZ36_02530 | Not Available | Negative | 662617 - 662982 | 14087.0 |
| copper resistance protein nlpe | DWZ36_02535 | Not Available | Negative | 663168 - 663596 | 15888.7 |
| abc transporter permease | DWZ36_02540 | Not Available | Negative | 663632 - 664882 | 47511.7 |
| abc transporter permease | DWZ36_02545 | Not Available | Negative | 664897 - 666072 | 44227.0 |
| biotin/lipoyl-binding protein | DWZ36_02550 | Not Available | Negative | 666079 - 667065 | 35945.9 |
| tolc family protein | DWZ36_02555 | Not Available | Negative | 667092 - 668555 | 53453.8 |
| hypothetical protein | DWZ36_02560 | Not Available | Negative | 668771 - 669643 | 33451.4 |
| malate dehydrogenase | DWZ36_02565 | Not Available | Positive | 669800 - 670741 | 32879.0 |
| hypothetical protein | DWZ36_02570 | Not Available | Negative | 670839 - 672623 | 65156.6 |
| chromosome partitioning protein parb | DWZ36_02575 | Not Available | Negative | 672651 - 673163 | 19744.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

