Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | DWZ36_02420 | Not Available | Negative | 637466 - 639361 | 73989.7 |
| hypothetical protein | DWZ36_02430 | Not Available | Positive | 640446 - 640829 | 14548.6 |
| hypothetical protein | DWZ36_02435 | Not Available | Positive | 640876 - 641271 | 14991.0 |
| hypothetical protein | DWZ36_02440 | Not Available | Positive | 641495 - 641695 | 7208.15 |
| radical sam protein | DWZ36_02445 | Not Available | Positive | 641823 - 643202 | 52552.6 |
| hypothetical protein | DWZ36_02450 | Not Available | Positive | 643238 - 645547 | 87830.4 |
| peptidase c39 | DWZ36_02460 | Not Available | Negative | 647346 - 647933 | 23231.6 |
| hypothetical protein | DWZ36_02465 | Not Available | Negative | 648054 - 648980 | 35832.6 |
| duf3244 domain-containing protein | DWZ36_02470 | Not Available | Negative | 649124 - 649528 | 14848.9 |
| tetratricopeptide repeat protein | DWZ36_02475 | Not Available | Negative | 649687 - 651543 | 72895.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

