Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_02370 | Not Available | Negative | 628838 - 629059 | 8449.06 |
| hypothetical protein | DWZ36_02375 | Not Available | Positive | 629372 - 629995 | 23177.9 |
| peptidase c39 | DWZ36_02380 | Not Available | Negative | 629961 - 630542 | 23420.5 |
| radical sam protein | DWZ36_02385 | Not Available | Negative | 630535 - 632046 | 58154.3 |
| hypothetical protein | DWZ36_02390 | Not Available | Negative | 632024 - 632227 | 7562.53 |
| hlyd family efflux transporter periplasmic adaptor subunit | DWZ36_02395 | Not Available | Negative | 632276 - 633421 | 43737.3 |
| peptidase domain-containing abc transporter | DWZ36_02400 | Not Available | Negative | 633470 - 635671 | 83543.6 |
| hypothetical protein | DWZ36_02405 | Not Available | Negative | 635668 - 636582 | 35539.9 |
| hypothetical protein | DWZ36_02410 | Not Available | Negative | 636615 - 636854 | 9362.56 |
| duf3244 domain-containing protein | DWZ36_02415 | Not Available | Negative | 636889 - 637302 | 15375.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

