Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_02210 | Not Available | Negative | 582780 - 584177 | 52254.0 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DWZ36_02215 | Not Available | Negative | 584305 - 585357 | 39668.4 |
| peptide chain release factor n(5)-glutamine methyltransferase | DWZ36_02220 | Not Available | Positive | 585402 - 586238 | 31726.2 |
| recx family transcriptional regulator | DWZ36_02225 | Not Available | Positive | 586240 - 586725 | 18841.7 |
| comf family protein | DWZ36_02230 | Not Available | Positive | 586706 - 587401 | 26034.9 |
| orotate phosphoribosyltransferase | DWZ36_02235 | Not Available | Positive | 587501 - 588139 | 23412.4 |
| srpbcc family protein | DWZ36_02240 | Not Available | Positive | 588237 - 588641 | 15197.6 |
| argininosuccinate lyase | DWZ36_02245 | Not Available | Positive | 588656 - 589996 | 50611.4 |
| l-glyceraldehyde 3-phosphate reductase | DWZ36_02250 | Not Available | Positive | 590020 - 591012 | 36721.9 |
| Trna-gly | Not Available | Not Available | Positive | 591083 - 591155 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

