Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_21970 | Not Available | Negative | 5090489 - 5090875 | 13527.2 |
| dna-binding protein | DWZ36_21975 | Not Available | Positive | 5090828 - 5091151 | 12529.9 |
| hypothetical protein | DWZ36_21980 | Not Available | Positive | 5091345 - 5091530 | 6656.23 |
| hypothetical protein | DWZ36_21985 | Not Available | Positive | 5091503 - 5091952 | 16415.0 |
| sigma-70 family rna polymerase sigma factor | DWZ36_21990 | Not Available | Negative | 5092107 - 5092325 | 8571.49 |
| duf4595 domain-containing protein | DWZ36_21995 | Not Available | Negative | 5093087 - 5093887 | 30453.9 |
| is1380 family transposase | DWZ36_22000 | Not Available | Positive | 5094075 - 5095361 | 49310.4 |
| hypothetical protein | DWZ36_22005 | Not Available | Positive | 5095560 - 5095892 | 12653.0 |
| duf3408 domain-containing protein | DWZ36_22010 | Not Available | Positive | 5095882 - 5096376 | 18532.7 |
| plasmid mobilization relaxosome protein mobc | DWZ36_22015 | Not Available | Positive | 5096608 - 5097012 | 15185.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

