Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_21915 | Not Available | Positive | 5083369 - 5083692 | 11453.6 |
| duf4476 domain-containing protein | DWZ36_21920 | Not Available | Negative | 5083762 - 5083931 | 6257.45 |
| is66-like element isbvu4 family transposase | DWZ36_21930 | Not Available | Positive | 5084601 - 5086214 | 61911.8 |
| hypothetical protein | DWZ36_21935 | Not Available | Positive | 5086322 - 5086648 | 12003.7 |
| hypothetical protein | DWZ36_21940 | Not Available | Negative | 5087000 - 5087305 | 10721.8 |
| hypothetical protein | DWZ36_21945 | Not Available | Negative | 5087668 - 5088228 | 21215.1 |
| atp-dependent helicase | DWZ36_21950 | Not Available | Negative | 5088366 - 5089147 | 30038.4 |
| hepn domain-containing protein | DWZ36_21955 | Not Available | Negative | 5089586 - 5089990 | 15386.7 |
| nucleotidyltransferase domain-containing protein | DWZ36_21960 | Not Available | Negative | 5089981 - 5090301 | 12470.8 |
| dna-binding protein | DWZ36_21965 | Not Available | Positive | 5090420 - 5090497 | 2856.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

