Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mobilization protein | DWZ36_21860 | Not Available | Positive | 5073164 - 5073875 | 27073.3 |
| hypothetical protein | DWZ36_21865 | Not Available | Positive | 5073975 - 5074196 | 8182.75 |
| hypothetical protein | DWZ36_21870 | Not Available | Positive | 5074209 - 5074781 | 22045.7 |
| hypothetical protein | DWZ36_21875 | Not Available | Negative | 5074921 - 5075274 | 13182.5 |
| hypothetical protein | DWZ36_21880 | Not Available | Negative | 5075294 - 5075779 | 18443.3 |
| duf4065 domain-containing protein | DWZ36_21885 | Not Available | Negative | 5075785 - 5076342 | 21054.3 |
| aaa family atpase | DWZ36_21895 | Not Available | Positive | 5078255 - 5079010 | 28940.3 |
| group ii intron reverse transcriptase/maturase | DWZ36_21900 | Not Available | Negative | 5079214 - 5081022 | 70603.7 |
| winged helix dna-binding domain-containing protein | DWZ36_21905 | Not Available | Negative | 5081622 - 5082674 | 40541.8 |
| cytidine deaminase | DWZ36_21910 | Not Available | Negative | 5082671 - 5083150 | 17702.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

