Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_21795 | Not Available | Positive | 5063113 - 5064408 | 49544.6 |
| hypothetical protein | DWZ36_21800 | Not Available | Positive | 5064585 - 5065016 | 16525.2 |
| duf3853 family protein | DWZ36_21810 | Not Available | Positive | 5066385 - 5066693 | 11297.9 |
| mobilization protein | DWZ36_21815 | Not Available | Positive | 5066705 - 5067772 | 40478.6 |
| nad(p)-dependent oxidoreductase | DWZ36_21830 | Not Available | Negative | 5069068 - 5070081 | 37901.7 |
| glycosyltransferase family 2 protein | DWZ36_21835 | Not Available | Negative | 5070093 - 5070905 | 31984.8 |
| mobilization protein | DWZ36_21840 | Not Available | Positive | 5071117 - 5071518 | 15359.3 |
| repa protein | DWZ36_21845 | Not Available | Positive | 5071956 - 5072546 | 22565.2 |
| hypothetical protein | DWZ36_21850 | Not Available | Positive | 5072536 - 5072808 | 10080.4 |
| hypothetical protein | DWZ36_21855 | Not Available | Positive | 5072877 - 5073074 | 7343.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

