Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| charged multivesicular body protein 2b-b | DWZ36_21740 | Not Available | Positive | 5054114 - 5054344 | 8379.17 |
| replication initiation protein | DWZ36_21745 | Not Available | Negative | 5054383 - 5055387 | 39162.5 |
| hypothetical protein | DWZ36_21750 | Not Available | Negative | 5055338 - 5055523 | 7198.52 |
| cell surface protein | DWZ36_21755 | Not Available | Negative | 5055844 - 5058570 | 97952.1 |
| arac family transcriptional regulator | DWZ36_21760 | Not Available | Negative | 5058671 - 5058902 | 8804.73 |
| hypothetical protein | DWZ36_21765 | Not Available | Negative | 5059067 - 5059822 | 28993.8 |
| hypothetical protein | DWZ36_21770 | Not Available | Positive | 5060161 - 5060601 | 16935.5 |
| hypothetical protein | DWZ36_21775 | Not Available | Negative | 5060772 - 5061401 | 24237.5 |
| is66 family transposase | DWZ36_21785 | Not Available | Positive | 5062029 - 5062501 | 18157.3 |
| hypothetical protein | DWZ36_21790 | Not Available | Positive | 5062676 - 5063128 | 16610.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

