Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_21570 | Not Available | Positive | 5031562 - 5032011 | 17373.3 |
| hypothetical protein | DWZ36_21575 | Not Available | Positive | 5032015 - 5032266 | 10165.5 |
| hypothetical protein | DWZ36_21580 | Not Available | Positive | 5032271 - 5033029 | 29777.3 |
| hypothetical protein | DWZ36_21585 | Not Available | Positive | 5033033 - 5033488 | 17137.8 |
| hypothetical protein | DWZ36_21590 | Not Available | Positive | 5033497 - 5033892 | 14570.1 |
| hypothetical protein | DWZ36_21595 | Not Available | Positive | 5033991 - 5034188 | 7749.47 |
| hypothetical protein | DWZ36_21600 | Not Available | Positive | 5034753 - 5035013 | 9418.32 |
| recombinase family protein | DWZ36_21605 | Not Available | Positive | 5035027 - 5035788 | 28415.8 |
| duf4065 domain-containing protein | DWZ36_21610 | Not Available | Positive | 5035874 - 5036422 | 20872.0 |
| hypothetical protein | DWZ36_21615 | Not Available | Positive | 5036419 - 5036880 | 17237.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

