Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_21510 | Not Available | Negative | 5018783 - 5018998 | 8413.26 |
| dna-binding protein | DWZ36_21515 | Not Available | Negative | 5019033 - 5019284 | 9638.41 |
| hypothetical protein | DWZ36_21530 | Not Available | Negative | 5021388 - 5021960 | 21555.6 |
| luxr family transcriptional regulator | DWZ36_21535 | Not Available | Negative | 5022107 - 5023387 | 50037.5 |
| hypothetical protein | DWZ36_21540 | Not Available | Negative | 5023765 - 5024046 | 10998.3 |
| beta-galactosidase | DWZ36_21545 | Not Available | Negative | 5024765 - 5026804 | 78160.0 |
| port family protein | DWZ36_21550 | Not Available | Negative | 5027097 - 5027777 | 25533.0 |
| transposase | DWZ36_21555 | Not Available | Negative | 5028045 - 5028680 | 25026.1 |
| dna primase | DWZ36_21560 | Not Available | Positive | 5028864 - 5029697 | 31762.0 |
| mobilization protein | DWZ36_21565 | Not Available | Positive | 5029881 - 5031227 | 51875.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

