Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 127 protein | DWZ36_21460 | Not Available | Positive | 5012109 - 5014495 | 89382.9 |
| repb family plasmid replication initiator protein | DWZ36_21465 | Not Available | Negative | 5015046 - 5016203 | 45203.0 |
| hypothetical protein | DWZ36_21470 | Not Available | Negative | 5016366 - 5016578 | 8389.09 |
| hypothetical protein | DWZ36_21475 | Not Available | Negative | 5016568 - 5017050 | 19008.0 |
| hypothetical protein | DWZ36_21480 | Not Available | Negative | 5017084 - 5017401 | 12712.0 |
| hypothetical protein | DWZ36_21485 | Not Available | Negative | 5017420 - 5017638 | 8409.15 |
| hypothetical protein | DWZ36_21490 | Not Available | Negative | 5017669 - 5017875 | 7800.2 |
| hypothetical protein | DWZ36_21495 | Not Available | Negative | 5017888 - 5018079 | 7123.68 |
| hypothetical protein | DWZ36_21500 | Not Available | Negative | 5018096 - 5018275 | 6728.84 |
| hypothetical protein | DWZ36_21505 | Not Available | Negative | 5018322 - 5018711 | 15156.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

