Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase | DWZ36_21330 | Not Available | Negative | 4985983 - 4987173 | 46601.9 |
| dna-binding protein | DWZ36_21335 | Not Available | Negative | 4987178 - 4987492 | 11936.6 |
| recombinase | DWZ36_21345 | Not Available | Negative | 4988611 - 4989945 | 52130.6 |
| hypothetical protein | DWZ36_21360 | Not Available | Negative | 4991266 - 4991433 | 6488.94 |
| hypothetical protein | DWZ36_21365 | Not Available | Negative | 4991794 - 4992615 | 32953.4 |
| hypothetical protein | DWZ36_21370 | Not Available | Negative | 4992624 - 4993961 | 51350.1 |
| dna-binding protein | DWZ36_21375 | Not Available | Negative | 4994203 - 4994622 | 16505.4 |
| bifunctional dna primase/helicase | DWZ36_21380 | Not Available | Negative | 4994619 - 4996691 | 77726.7 |
| helix-turn-helix domain-containing protein | DWZ36_21385 | Not Available | Negative | 4996684 - 4997019 | 13348.1 |
| site-specific integrase | DWZ36_21390 | Not Available | Positive | 4998167 - 4999402 | 47382.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

