Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_21275 | Not Available | Positive | 4978840 - 4979205 | 14053.8 |
| hypothetical protein | DWZ36_21280 | Not Available | Positive | 4979178 - 4979591 | 16037.5 |
| hypothetical protein | DWZ36_21285 | Not Available | Positive | 4979596 - 4979976 | 15501.5 |
| hypothetical protein | DWZ36_21290 | Not Available | Positive | 4979960 - 4980697 | 29342.2 |
| penicillin-binding protein | DWZ36_21295 | Not Available | Positive | 4980694 - 4981770 | 39409.1 |
| hypothetical protein | DWZ36_21300 | Not Available | Positive | 4981767 - 4982156 | 15050.7 |
| hypothetical protein | DWZ36_21305 | Not Available | Positive | 4982434 - 4982871 | 16836.1 |
| hypothetical protein | DWZ36_21310 | Not Available | Positive | 4983000 - 4983506 | 19422.1 |
| hypothetical protein | DWZ36_21315 | Not Available | Positive | 4983764 - 4984354 | 22584.1 |
| dna primase | DWZ36_21325 | Not Available | Negative | 4984870 - 4985750 | 33765.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

