Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | DWZ36_02055 | Not Available | Negative | 550101 - 551126 | 39472.3 |
| lipopolysaccharide biosynthesis protein | DWZ36_02060 | Not Available | Negative | 551126 - 552562 | 53569.4 |
| methionine--trna ligase | DWZ36_02065 | Not Available | Negative | 552644 - 554686 | 77707.9 |
| recombinase family protein | DWZ36_02075 | Not Available | Positive | 555897 - 557768 | 71194.2 |
| energy transducer tonb | DWZ36_02080 | Not Available | Positive | 558274 - 558840 | 21122.1 |
| hypothetical protein | DWZ36_02085 | Not Available | Positive | 558876 - 559343 | 18268.1 |
| duf4595 domain-containing protein | DWZ36_02090 | Not Available | Negative | 559441 - 560241 | 30558.0 |
| hypothetical protein | DWZ36_02095 | Not Available | Negative | 560276 - 560731 | 16993.1 |
| site-specific integrase | DWZ36_02100 | Not Available | Negative | 561320 - 561907 | 22498.6 |
| duf3871 family protein | DWZ36_02105 | Not Available | Negative | 562215 - 563228 | 38201.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

