Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m15 | DWZ36_21215 | Not Available | Positive | 4970174 - 4970572 | 15104.0 |
| hypothetical protein | DWZ36_21225 | Not Available | Positive | 4970855 - 4971109 | 9521.57 |
| hypothetical protein | DWZ36_21230 | Not Available | Negative | 4971582 - 4974113 | 95867.8 |
| hypothetical protein | DWZ36_21235 | Not Available | Positive | 4974368 - 4974700 | 12616.3 |
| hypothetical protein | DWZ36_21240 | Not Available | Positive | 4974730 - 4975554 | 31907.1 |
| hypothetical protein | DWZ36_21245 | Not Available | Positive | 4975634 - 4976323 | 27242.0 |
| hypothetical protein | DWZ36_21250 | Not Available | Positive | 4976433 - 4976861 | 16146.5 |
| hypothetical protein | DWZ36_21260 | Not Available | Positive | 4977140 - 4977430 | 10877.9 |
| hypothetical protein | DWZ36_21265 | Not Available | Negative | 4977521 - 4977820 | 11439.9 |
| hypothetical protein | DWZ36_21270 | Not Available | Positive | 4978350 - 4978790 | 17248.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

